Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951238.1_cds_XP_016491331.1_81660
CDS Infomation

[gene=LOC107811010] [db_xref=GeneID:107811010] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016491331.1] [location=complement(join(34676..36160,36919..36993))] [gbkey=CDS]
Sequence

ATGGCACACTCTATTGAGATTACCCCAATTGATCACCGAACTCCGCTGCTTCGTCAAGCA
ACAAAAGATGATGAGATAAAAGAAGGGGAGAAAGTGGGTCATTTAATCGAGACTAATAAA
AGAGATGGTCAAGATCGACCAGGTTTTCAAACAAGTAAATCTGCAAATAAAATCTTAGAT
GAAATATATAAGGATTTGGACAATTTGGCTATCAGGTCCACCACCATATTCAAAGTAAAT
GTGGGGTTACGTGAATCAAATCCAGATGCTTATACACCAAAAATGATCTCCATTGGTCCT
TACCATAAAAAAAATCAAGAACTTCACTCAATGGAAAAGTACAAATTGTTATACCTACAA
CGGTTTCTCCGGCGGAAAGAGGGGCTTAACGTGGAAAGTTGCATCAGAGAATTGGAGGAA
CTGAAAGATGAAGCATTAATGTGTTATGATGACATAAAGGACCTTATCGATAGTGACAAC
AACACTGGTGAATTTTTGAAAATGTTGTTGTTTGATGGTTGTTTTTTGGTTGAGTTTATT
CGAGAGGTTATTGGAATAAAACCAACAGGAGAAGACATGATTATCCTTGGAGGTTGCCTT
GATGACCAAGTACGTCGTGACTTGTTGTTATTAGAAAACCAACTTCCCTTTTTTGTCCTT
ACCAAACTTCATGACATGACTAAAGATGAAATTTATGACATACCATTCACAAAAATGGTG
AAGTGGATTTTTTTTCATGATTTACCGAAGCTGACCCCTGCATCCTTTAATGAGAGTGCA
GGTAATGCCGCAGAAATCAAACATTTACTTCAAGTAATACACATGTCATGTCACCCTTCA
GAGATGAAAACTAATAAGCTAACTGGGAATATTAGCAAGGAAGCAGAACATTCCAGGAAA
AACTTATGTTGTAATCTTTTGCAAAGAGTTAGGCCGAAAGAAATGCCAAAAGATAAGGAC
AACCTGACATGGCAAGACAACATGCCAAATGCTACAGAGCTTTGCGAAGCTGGAGTTGGA
TTTTCAAAAGTTGGAAATATTTATGCTTGCTTGGCGGAAGATAACCTTGGAGATAGCACA
AGTTTATTTGATATTGGATTTGAGAATGGATTGATGACAATTCCTTGTTTTAAAGTCACC
GATAATACAGAGACCCTCCTGAGAAATTTTATAGCTTACGAGCAACATTCACCTGATATA
GATCCTAAATATTTCAGTGAATTTGCAGTTTTCATGGATCATCTTATCGACTCGGAAAAA
GATGTCACTCTGCTTCGCCTAAAAGGAATTATCGCGAATGACATAGGAGAGGACAAAGAA
GTGGCTAACTTATTTAATAACATTGGGAAGGGGGTCGGTATTTCATCAGACTTCCATTAC
AAAGAAGTATGTGGAAAAGCAGTGCAACATTGTGAACAACCATGGAACAGAATGAAGGCA
AGTTTGAGGCGCAATTATTTTCATAGTCCGTGGGCAGGAGTTTCAACTGTGGCGGCCGTC
ATACTCCTCTTACTCACAGTTACACAGACAGTTTTATCTTTCATAAGTGTTCTTAAGTAG

Peptide Sequence

PEP ID

XP_016491331.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MAHSIEITPIDHRTPLLRQATKDDEIKEGEKVGHLIETNKRDGQDRPGFQTSKSANKILD
EIYKDLDNLAIRSTTIFKVNVGLRESNPDAYTPKMISIGPYHKKNQELHSMEKYKLLYLQ
RFLRRKEGLNVESCIRELEELKDEALMCYDDIKDLIDSDNNTGEFLKMLLFDGCFLVEFI
REVIGIKPTGEDMIILGGCLDDQVRRDLLLLENQLPFFVLTKLHDMTKDEIYDIPFTKMV
KWIFFHDLPKLTPASFNESAGNAAEIKHLLQVIHMSCHPSEMKTNKLTGNISKEAEHSRK
NLCCNLLQRVRPKEMPKDKDNLTWQDNMPNATELCEAGVGFSKVGNIYACLAEDNLGDST
SLFDIGFENGLMTIPCFKVTDNTETLLRNFIAYEQHSPDIDPKYFSEFAVFMDHLIDSEK
DVTLLRLKGIIANDIGEDKEVANLFNNIGKGVGISSDFHYKEVCGKAVQHCEQPWNRMKA
SLRRNYFHSPWAGVSTVAAVILLLLTVTQTVLSFISVLK

Transcript Sequence

Gene sequence data has not been registered.